Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849049.1_cds_XP_016510659.1_23473
CDS Infomation

[gene=LOC107827938] [db_xref=GeneID:107827938] [protein=KH domain-containing protein At4g18375-like] [protein_id=XP_016510659.1] [location=complement(join(1189..1320,1516..1627,1860..1942,2031..2324,3479..3742,3824..4267,5624..6220))] [gbkey=CDS]
Sequence

ATGCACGAACCCAACCTCGTCGCCGCCTCCTCCGTCCCCCACTCCGCCACCACCGTACCC
GCCGCCGCCAACAACAACTCACCGCTACCGAGGCGTGTCGTGTTCCGTCTCCTCTGCCAT
GCTTCCCGCGTCGGAGGAGTCATCGGAAAATCAGGTTCCATCATCCGACAACTCCAACAA
GATACCTCCGCAAAGATTCACGTTGATGTCTCCACTCCCAACTCCGACCACCACCGCCTC
ATCGTCGTCGTAGCCTCCGCTTCCCTAAACAAGAAGATTAGGCTCAATCTCTTGGGCCCC
ACCGGGGGGGATGAGCAGCAGTGGAATGATGAGATTGAGGTTTCGGCTGCACAAGAGGCA
CTCGTTAGGGTTTTCGAAAGAGTGATAGATGTAACAGCTGAAAATAATGGCGTTGTTTTG
GGTGCGGAGAGTGTGGTGTCGTGTAGGTTATTAGTGAAGGGGAATCAGGTGGGTGCTTTG
ATGGGTAAAGGTGGAAAAGTAATTGATGCAATTAGAAGAGAGAATGGATGTAGGATTAAG
GTTTTAACTTCAGATAAGTTGCCATCTTGTGCTTCGCCCAATGATGAAATAGTTGAGATA
GAAGGGGACATTCTGGCTGTTAAGAAAGCACTTGTTGCTGTCAGTCGCCGACTTCAAGAT
TGTTTCTCTGTTGAAAGAAATAGAACGGTTGAGAATGCGCCACTTGAGTTAGATTCGGAA
CAGACTTTGCCTCCTCGGCAAGTTGATCTACCTGCACAAAGGAGTTCAATGTCACAGCCC
ATAACCACAAGCTCTTTCTCAGGTGCCTCTGGATGCCATCCTGTGTCTCTAGATGCTGAG
AAGTTTTCCAACATTGATGCAAAAATACCATTACAAGAGGTTGCTTTCAGGATTCTCTGC
CCAAATGAAAAGGTTGGTGCAATAATAGGCAAGGGTGGGGCAATTGTAAGGACTCTTCAG
AATGACAGCGGTGCAAGCATCGCTGTTGGGCCAAATGTCGTTGAGTGCAACGAGCGAGTG
ATAGCTATTACCGCATTAGAGAACCTAGAATTACGGAAATCTCCAGCACAAACCGCTGCG
GTTCTTGTTTTTGATCGGATTCTGGACGCTGGCTCTGGGATGAATTTGGGTACAAGATCA
CTAATTACATTTCGACTTGTGGTGCCATCCAACCAAGTTGGTTGTTTATTGGGGAAGGGA
GGCGCAATAATTTCAGAGATAAGGAAGGAGACAGGTTCCAGCATACGAATATTTAGAGGT
GACCAAGTCCCTAAGTGTGTCTCAGACAATGATGAAGTTGTGCAGATTGCAGGTGAGTTT
GTAAATGTACAAGATGCTTTACGAAATGTCACTGGTCGGTTGCGTGATAACCTCTTGGCA
GCGAAGGTGTCAAATGGTGCTGTAAGCAGAAACAGCTCTCCTCTGGCGTCTGAAAGTAGT
TTCTCTGGCCAAATGAAGGAACCTCCTTTTGGATTTCATCGGTCTAGTGGTGTCTCACAT
GGTATCAATCAGCATCCTGATTTAACACGGTCTATGGATAACCTTGTACTTTCCAACAAC
ATAGATCATCCCCCATCACCAGGACAGTGGTCATCACAGACACGACCTGGAGGAAACCAA
AGAGGTGCTTTTGACGTCAGCAAAGGATCTAATTCAGTAAAAGGCGGCATAGAACTTGGA
TGTGGAAGCAGATCTGCCATTGTGACCAATACTACTGTGGAGATCTTGGTTCCTGAAAGT
GTTATCAGCTCTGTGTATGGGGAGAACGGGAGCAACTTGGCTCGTCTAAGACAGATTTCA
GGTGCAAAGGTCATGGTACACGAGGGCCGCTCTGGAACAACTGACAGGACTATCGTAATC
TCTGGGACACCAGATGAAACACAGGCTGCTCAGAGCCTCCTTCAGGCATTCATACTAACT
GGATAG

Peptide Sequence

PEP ID

XP_016510659.1
PEP Infomation

PREDICTED: KH domain-containing protein At4g18375-like [Nicotiana tabacum]
Sequence

MHEPNLVAASSVPHSATTVPAAANNNSPLPRRVVFRLLCHASRVGGVIGKSGSIIRQLQQ
DTSAKIHVDVSTPNSDHHRLIVVVASASLNKKIRLNLLGPTGGDEQQWNDEIEVSAAQEA
LVRVFERVIDVTAENNGVVLGAESVVSCRLLVKGNQVGALMGKGGKVIDAIRRENGCRIK
VLTSDKLPSCASPNDEIVEIEGDILAVKKALVAVSRRLQDCFSVERNRTVENAPLELDSE
QTLPPRQVDLPAQRSSMSQPITTSSFSGASGCHPVSLDAEKFSNIDAKIPLQEVAFRILC
PNEKVGAIIGKGGAIVRTLQNDSGASIAVGPNVVECNERVIAITALENLELRKSPAQTAA
VLVFDRILDAGSGMNLGTRSLITFRLVVPSNQVGCLLGKGGAIISEIRKETGSSIRIFRG
DQVPKCVSDNDEVVQIAGEFVNVQDALRNVTGRLRDNLLAAKVSNGAVSRNSSPLASESS
FSGQMKEPPFGFHRSSGVSHGINQHPDLTRSMDNLVLSNNIDHPPSPGQWSSQTRPGGNQ
RGAFDVSKGSNSVKGGIELGCGSRSAIVTNTTVEILVPESVISSVYGENGSNLARLRQIS
GAKVMVHEGRSGTTDRTIVISGTPDETQAAQSLLQAFILTG

Transcript Sequence

Gene sequence data has not been registered.